switchde - Switch-like differential expression across single-cell trajectories

Inference and detection of switch-like differential expression across single-cell RNA-seq trajectories.

Last updated 24 days ago

immunooncologysoftwaretranscriptomicsgeneexpressionrnaseqregressiondifferentialexpressionsinglecellgene-expressiongenomicssingle-cell

5.98 score 19 stars 6 scripts 185 downloads

mfa - Bayesian hierarchical mixture of factor analyzers for modelling genomic bifurcations

MFA models genomic bifurcations using a Bayesian hierarchical mixture of factor analysers.

Last updated 24 days ago

immunooncologyrnaseqgeneexpressionbayesiansinglecell

4.85 score 35 scripts 283 downloads

phenopath - Genomic trajectories with heterogeneous genetic and environmental backgrounds

PhenoPath infers genomic trajectories (pseudotimes) in the presence of heterogeneous genetic and environmental backgrounds and tests for interactions between them.

Last updated 24 days ago

immunooncologyrnaseqgeneexpressionbayesiansinglecellprincipalcomponent

4.63 score 43 scripts 228 downloads