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switchde - Switch-like differential expression across single-cell trajectories

Inference and detection of switch-like differential expression across single-cell RNA-seq trajectories.

Last updated

immunooncologysoftwaretranscriptomicsgeneexpressionrnaseqregressiondifferentialexpressionsinglecellgene-expressiongenomicssingle-cell

6.04 score 22 stars 9 scripts 497 downloads

phenopath - Genomic trajectories with heterogeneous genetic and environmental backgrounds

PhenoPath infers genomic trajectories (pseudotimes) in the presence of heterogeneous genetic and environmental backgrounds and tests for interactions between them.

Last updated

immunooncologyrnaseqgeneexpressionbayesiansinglecellprincipalcomponentcpp

4.00 score 652 downloads